You have reached your Codex usage limits for code reviews. You can see your limits in the Codex usage dashboard.
To continue using code reviews, you can upgrade your account or add credits to your account and enable them for code reviews in your settings.

Greptile Summary

Exposes all 10 MCP tools as CLI commands for vendor-neutral scripting and debugging. Creates initToolContext() that builds a ToolContext from on-disk index, routing commands via dispatchTool().

Major changes:

• Added 8 new CLI subcommands (search, metadata, status, reindex, style-guide, patterns, refs, cycles) to src/cli.ts
• Each command maps to existing MCP tool handlers
• Supports --json flag for raw output vs human-readable
• Updated README and docs/capabilities.md with comprehensive examples and reference tables
• Refactored src/index.ts to route all CLI commands through handleCliCommand()

Issues found:

• Filter construction bug in search command (lines 205-207) - multiple filter flags will overwrite each other instead of merging

Confidence Score: 4/5

• Safe to merge after fixing the filter construction bug - the logic error will break multi-filter searches but other functionality is solid
• Score reflects one critical logic bug that breaks search when combining multiple filter flags (lang + framework + layer), but the rest of the implementation is clean with good separation of concerns. Tests pass and architecture is sound.
• src/cli.ts lines 205-207 - fix filter merging logic before merge

Flowchart

%%{init: {'theme': 'neutral'}}%%
flowchart TD
    Start[CLI Entry: npx codebase-context] --> Parse[handleCliCommand argv]
    Parse --> Memory{command === 'memory'?}
    Memory -->|Yes| MemoryCLI[handleMemoryCli]
    Memory -->|No| Init[initToolContext]
    
    Init --> CheckIndex{index exists?}
    CheckIndex -->|Yes| Ready[indexState: 'ready']
    CheckIndex -->|No| Idle[indexState: 'idle']
    
    Ready --> Route[Route by command]
    Idle --> Route
    
    Route --> Search[search → search_codebase]
    Route --> Metadata[metadata → get_codebase_metadata]
    Route --> Status[status → get_indexing_status]
    Route --> Reindex[reindex → refresh_index]
    Route --> StyleGuide[style-guide → get_style_guide]
    Route --> Patterns[patterns → get_team_patterns]
    Route --> Refs[refs → get_symbol_references]
    Route --> Cycles[cycles → detect_circular_dependencies]
    
    Search --> Dispatch[dispatchTool]
    Metadata --> Dispatch
    Status --> Dispatch
    StyleGuide --> Dispatch
    Patterns --> Dispatch
    Refs --> Dispatch
    Cycles --> Dispatch
    
    Reindex --> PerformIndex[ctx.performIndexing]
    PerformIndex --> Dispatch
    
    Dispatch --> Format{--json flag?}
    Format -->|Yes| JSON[console.log raw JSON]
    Format -->|No| Pretty[console.log formatted]
    
    JSON --> End[Exit]
    Pretty --> End

_{Last reviewed commit: 9a2d523}

@copilot review

@PatrickSys I've opened a new pull request, #43, to work on those changes. Once the pull request is ready, I'll request review from you.